- Predicted Gene MLOC_62978
MLOC_62978 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_62978_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_62978_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 5.68784 | 5.47382 | 6.0113 | 5.59435 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.46792 | 2.41167 | 3.91433 | 2.3262 |
INF1 | Young developing inflorescences (5mm) | 0.0581816 | 0.0278987 | 0 | 0.0402729 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0.0128051 | 0 | 0.0211708 |
ROO | Roots from the seedlings (10 cm shoot stage) | 75.3698 | 64.7561 | 70.5483 | 71.8378 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.32723 | 2.6373 | 2.57811 | 2.59512 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.343034 | 0.0384129 | 0.338772 | 0.568413 |
CDS Structure of MLOC_62978
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62978.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g42200.1 |
+1 |
0.0 |
1146 |
665/782 (85%) |
13112.m04430 protein ATCHX, putative, expressed |
TAIR PP10 |
AT3G17630.1 |
+1 |
0.0 |
860 |
506/792 (64%) |
| Symbols: ATCHX19, CHX19 | cation/H+ exchanger 19 | chr3:6029201-6031773 FORWARD LENGTH=800 |