- Predicted Gene MLOC_62948
MLOC_62948 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.0687103 | 0.0588781 | 0 | 0.0814523 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.325365 | 0.336232 | 0.28211 | 0.265425 |
| INF1 | Young developing inflorescences (5mm) | 0.179712 | 0 | 0.149313 | 0.129993 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.150855 | 0.141806 | 0 | 0.197603 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.11409 | 0.0648844 | 0 | 0.15626 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.069895 | 0.0347596 | 0.306732 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.240673 | 0.0544702 | 0.0668956 | 0.108627 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.189337 | 0 | 0 | 0.706448 |
CDS Structure of MLOC_62948
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62948.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g50192.1 |
-3 |
4e-84 |
277 |
144/308 (47%) |
13104.m05138 protein retrotransposon protein, putative, LINE subclass |
| TAIR PP10 |
AT1G43760.1 |
-3 |
1e-11 |
66 |
44/176 (25%) |
DNAse I-like superfamily protein | chr1:16528880-16531065 REVERSE LENGTH=626 |