MLOC_62946 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.982119.657296.423625.18994
LEAShoots from the seedlings (10 cm shoot stage)11.26059.205347.927656.83217
INF1Young developing inflorescences (5mm)20.929520.411920.118712.9766
INF2Developing inflorescences (1-1.5 cm)27.715127.946523.665723.9139
ROORoots from the seedlings (10 cm shoot stage)6.7948711.03548.142999.66671
NODDeveloping tillers at six leaf stage, 3rd internode4.86915.69756.8282217.236
CAR5Developing grain, bracts removed (5 DPA)13.015210.176513.65229.40789
CAR15Developing grain, bracts removed (15 DPA)5.76395.961675.141049.77867



CDS Structure of MLOC_62946






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62946.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_62946.2CUST_12915_PI427708083AvailableAvailablecontig_47116 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g03570.1 +1 5e-116 359 192/252 (76%) 13111.m00297 protein protein of unknown function, DUF618 domain containing protein, expressed
TAIR PP10 AT5G10060.1 +1 1e-67 228 120/254 (47%) ENTH/VHS family protein | chr5:3145994-3148049 REVERSE LENGTH=469