- Predicted Gene MLOC_62936
MLOC_62936 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_62936_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_62936_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0 | 0.0346061 | 0 | 0.0665324 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0.0526795 | 0.0503893 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0.0280287 | 0.0411031 | 0.0641916 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0 | 0 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.219472 | 0.413413 | 0.215928 | 0.648618 |
CDS Structure of MLOC_62936
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62936.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g06530.1 |
-3 |
2e-84 |
277 |
156/395 (39%) |
13101.m00644 protein retrotransposon protein, putative, unclassified |
TAIR PP10 |
AT3G24255.1 |
-3 |
2e-14 |
76 |
79/341 (23%) |
RNA-directed DNA polymerase (reverse transcriptase)-related family protein | chr3:8789471-8793208 FORWARD LENGTH=746 |