MLOC_62922 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains29.286319.61320.636722.095
LEAShoots from the seedlings (10 cm shoot stage)10.70586.214718.926237.03769
INF1Young developing inflorescences (5mm)20.571120.665617.271416.8687
INF2Developing inflorescences (1-1.5 cm)12.702213.423813.076414.7136
ROORoots from the seedlings (10 cm shoot stage)19.434217.437716.279420.1279
NODDeveloping tillers at six leaf stage, 3rd internode1.55151.625463.167125.62749
CAR5Developing grain, bracts removed (5 DPA)24.282125.335625.980925.6906
CAR15Developing grain, bracts removed (15 DPA)3.219153.526573.282758.20787



CDS Structure of MLOC_62922






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62922.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252571.1NoneNoneNoneNone
MLOC_62922.1CUST_4719_PI427708080AvailableAvailablecontig_47097 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g18750.1 +3 1e-163 464 233/264 (88%) 13105.m01979 protein ribosomal protein L25, putative, expressed
TAIR PP10 AT4G23620.1 +3 2e-106 318 164/268 (61%) Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain | chr4:12315016-12316659 REVERSE LENGTH=264