MLOC_62921 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.688815.210914.632315.9818
LEAShoots from the seedlings (10 cm shoot stage)8.923637.723316.776986.96521
INF1Young developing inflorescences (5mm)7.4709812.184211.64578.98865
INF2Developing inflorescences (1-1.5 cm)10.571811.80598.7572312.0369
ROORoots from the seedlings (10 cm shoot stage)43.873637.248332.465348.5046
NODDeveloping tillers at six leaf stage, 3rd internode56.078943.482736.1387145.133
CAR5Developing grain, bracts removed (5 DPA)6.795097.756038.625547.86003
CAR15Developing grain, bracts removed (15 DPA)21.742224.07621.383152.6277



CDS Structure of MLOC_62921






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62921.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369295NoneNoneNoneNone
MLOC_62921.1CUST_4718_PI427708080AvailableAvailablecontig_47097 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g41010.2 +2 1e-110 333 191/275 (69%) 13101.m04206 protein DUF581 domain containing protein, expressed
TAIR PP10 AT2G25690.2 +2 1e-20 93 81/288 (28%) Protein of unknown function (DUF581) | chr2:10940530-10941649 REVERSE LENGTH=324