- Predicted Gene MLOC_62913
MLOC_62913 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_62913_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 4.92551 | 6.62799 | 6.70975 | 6.01307 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.24651 | 3.88994 | 4.19687 | 3.983 |
INF1 | Young developing inflorescences (5mm) | 20.0408 | 17.8213 | 16.7366 | 14.6214 |
INF2 | Developing inflorescences (1-1.5 cm) | 14.011 | 12.981 | 14.1748 | 14.3878 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.44803 | 4.69875 | 5.34509 | 5.6214 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.35466 | 0.306142 | 1.02252 | 1.61365 |
CAR5 | Developing grain, bracts removed (5 DPA) | 9.33451 | 9.9088 | 9.59025 | 9.42626 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.10847 | 2.71542 | 2.1677 | 5.99675 |
CDS Structure of MLOC_62913
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62913.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g49620.1 |
-1 |
9e-94 |
310 |
241/403 (60%) |
13102.m05626 protein expressed protein |
TAIR PP10 |
AT5G38720.1 |
-1 |
8e-47 |
173 |
103/176 (59%) |
unknown protein; Has 13419 Blast hits to 9093 proteins in 698 species: Archae - 38; Bacteria - 1038; Metazoa - 4949; Fungi - 1086; Plants - 485; Viruses - 44; Other Eukaryotes - 5779 (source: NCBI BLink). | chr5:15508417-15510472 REVERSE LENGTH=306 |