MLOC_62913 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.925516.627996.709756.01307
LEAShoots from the seedlings (10 cm shoot stage)5.246513.889944.196873.983
INF1Young developing inflorescences (5mm)20.040817.821316.736614.6214
INF2Developing inflorescences (1-1.5 cm)14.01112.98114.174814.3878
ROORoots from the seedlings (10 cm shoot stage)2.448034.698755.345095.6214
NODDeveloping tillers at six leaf stage, 3rd internode0.354660.3061421.022521.61365
CAR5Developing grain, bracts removed (5 DPA)9.334519.90889.590259.42626
CAR15Developing grain, bracts removed (15 DPA)3.108472.715422.16775.99675



CDS Structure of MLOC_62913






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62913.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375858NoneNoneNoneNone
MLOC_62913.1CUST_4717_PI427708080AvailableAvailablecontig_47089 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g49620.1 -1 9e-94 310 241/403 (60%) 13102.m05626 protein expressed protein
TAIR PP10 AT5G38720.1 -1 8e-47 173 103/176 (59%) unknown protein; Has 13419 Blast hits to 9093 proteins in 698 species: Archae - 38; Bacteria - 1038; Metazoa - 4949; Fungi - 1086; Plants - 485; Viruses - 44; Other Eukaryotes - 5779 (source: NCBI BLink). | chr5:15508417-15510472 REVERSE LENGTH=306