- Predicted Gene MLOC_62874
MLOC_62874 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.16477 | 5.66191 | 5.14194 | 5.80525 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 83.2714 | 136.986 | 156.926 | 104.423 |
| INF1 | Young developing inflorescences (5mm) | 5.93514 | 6.39958 | 6.68519 | 5.68269 |
| INF2 | Developing inflorescences (1-1.5 cm) | 7.06989 | 5.91219 | 6.08017 | 7.39737 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.02862 | 1.88147 | 3.67633 | 2.58802 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 76.924 | 70.0423 | 116.014 | 235.211 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 12.807 | 14.4902 | 12.9459 | 14.1605 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.53014 | 8.55854 | 8.51544 | 21.393 |
CDS Structure of MLOC_62874
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62874.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g22730.1 |
+1 |
6e-35 |
122 |
59/83 (71%) |
13105.m02300 protein expressed protein |
| TAIR PP10 |
AT5G02120.1 |
+1 |
3e-31 |
112 |
57/84 (68%) |
| Symbols: OHP | one helix protein | chr5:419144-419633 FORWARD LENGTH=110 |
