- Predicted Gene MLOC_62873
MLOC_62873 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_62873_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_62873_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 36.1446 | 28.3384 | 29.8754 | 31.3649 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 44.4183 | 6.16638 | 10.6498 | 17.061 |
INF1 | Young developing inflorescences (5mm) | 3.94149 | 3.76112 | 3.39543 | 3.38013 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.95437 | 5.63152 | 7.92046 | 7.23564 |
ROO | Roots from the seedlings (10 cm shoot stage) | 18.0801 | 18.6647 | 16.0604 | 21.6931 |
NOD | Developing tillers at six leaf stage, 3rd internode | 17.9552 | 14.0408 | 14.9569 | 39.5179 |
CAR5 | Developing grain, bracts removed (5 DPA) | 35.9605 | 37.6508 | 34.5909 | 39.0064 |
CAR15 | Developing grain, bracts removed (15 DPA) | 38.1752 | 35.0356 | 28.6694 | 90.4829 |
CDS Structure of MLOC_62873
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62873.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g13920.1 |
+2 |
9e-134 |
397 |
187/272 (69%) |
13108.m01491 protein glycosyl hydrolases family 16, putative, expressed |
TAIR PP10 |
AT5G57560.1 |
+2 |
6e-79 |
254 |
127/276 (46%) |
| Symbols: TCH4, XTH22 | Xyloglucan endotransglucosylase/hydrolase family protein | chr5:23307296-23308235 REVERSE LENGTH=284 |