MLOC_62871 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5050980.2225110.682840
LEAShoots from the seedlings (10 cm shoot stage)1.220950.4084290.3465760
INF1Young developing inflorescences (5mm)0.223560.667262.212110
INF2Developing inflorescences (1-1.5 cm)1.085440.5012020.7396180
ROORoots from the seedlings (10 cm shoot stage)000.7578770
NODDeveloping tillers at six leaf stage, 3rd internode00.1935580.5301450
CAR5Developing grain, bracts removed (5 DPA)0.2295930.2067150.7470590
CAR15Developing grain, bracts removed (15 DPA)0.2387540.24771500



CDS Structure of MLOC_62871






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK367944
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367944CUST_25179_PI427708080NoneNoneNone
MLOC_20085.1NoneAvailableAvailablecontig_1587958 (Mapped)
MLOC_22748.1NoneAvailableNonecontig_161140 (Mapped)
MLOC_23273.1NoneAvailableNonecontig_16200 (Mapped)
MLOC_2420.2NoneAvailableNonecontig_1215070 (Not mapped)
MLOC_24572.1NoneAvailableNonecontig_1647934 (Mapped)
MLOC_27420.1NoneAvailableNonecontig_183056 (Not mapped)
MLOC_3051.1NoneAvailableNonecontig_1274195 (Not mapped)
MLOC_31617.1NoneAvailableNonecontig_2205597 (Not mapped)
MLOC_34277.1NoneAvailableNonecontig_2431736 (Not mapped)
MLOC_47594.1NoneAvailableNonecontig_308687 (Not mapped)
MLOC_48361.1NoneAvailableNonecontig_322117 (Mapped)
MLOC_62871.1NoneAvailableNonecontig_470503 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----