MLOC_62859 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains88.8675107.196100.855103.684
LEAShoots from the seedlings (10 cm shoot stage)62.149438.836933.278139.5163
INF1Young developing inflorescences (5mm)174.092166.032151.07139.072
INF2Developing inflorescences (1-1.5 cm)123.844118.681115.446132.118
ROORoots from the seedlings (10 cm shoot stage)40.64983.38274.736695.8041
NODDeveloping tillers at six leaf stage, 3rd internode18.594715.85425.094462.9339
CAR5Developing grain, bracts removed (5 DPA)115.559116.256120.819115.662
CAR15Developing grain, bracts removed (15 DPA)34.314834.381732.294677.9019



CDS Structure of MLOC_62859






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62859.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249431.1NoneNoneNoneNone
MLOC_62859.1CUST_4705_PI427708080AvailableAvailablecontig_47036 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g46620.1 +3 0.0 957 509/545 (93%) 13104.m04698 protein T-complex protein, putative, expressed
TAIR PP10 AT3G20050.1 +3 0.0 894 470/545 (86%) | Symbols: ATTCP-1, TCP-1 | T-complex protein 1 alpha subunit | chr3:6998544-7002266 REVERSE LENGTH=545