- Predicted Gene MLOC_62859
MLOC_62859 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_62859_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_62859_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 88.8675 | 107.196 | 100.855 | 103.684 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 62.1494 | 38.8369 | 33.2781 | 39.5163 |
INF1 | Young developing inflorescences (5mm) | 174.092 | 166.032 | 151.07 | 139.072 |
INF2 | Developing inflorescences (1-1.5 cm) | 123.844 | 118.681 | 115.446 | 132.118 |
ROO | Roots from the seedlings (10 cm shoot stage) | 40.649 | 83.382 | 74.7366 | 95.8041 |
NOD | Developing tillers at six leaf stage, 3rd internode | 18.5947 | 15.854 | 25.0944 | 62.9339 |
CAR5 | Developing grain, bracts removed (5 DPA) | 115.559 | 116.256 | 120.819 | 115.662 |
CAR15 | Developing grain, bracts removed (15 DPA) | 34.3148 | 34.3817 | 32.2946 | 77.9019 |
CDS Structure of MLOC_62859
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62859.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g46620.1 |
+3 |
0.0 |
957 |
509/545 (93%) |
13104.m04698 protein T-complex protein, putative, expressed |
TAIR PP10 |
AT3G20050.1 |
+3 |
0.0 |
894 |
470/545 (86%) |
| Symbols: ATTCP-1, TCP-1 | T-complex protein 1 alpha subunit | chr3:6998544-7002266 REVERSE LENGTH=545 |