- Predicted Gene MLOC_62857
MLOC_62857 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.52387 | 2.36045 | 2.47566 | 2.71466 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.76036 | 11.7018 | 16.6164 | 9.82447 |
| INF1 | Young developing inflorescences (5mm) | 1.83972 | 1.83422 | 2.7748 | 1.81261 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.29176 | 2.67633 | 2.946 | 2.88976 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.66895 | 2.9558 | 3.36394 | 3.79262 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.57951 | 4.80454 | 5.72847 | 14.0497 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.98214 | 3.66744 | 3.68744 | 3.43121 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.807434 | 0.805502 | 0.864205 | 2.01381 |
CDS Structure of MLOC_62857
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62857.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g07220.1 |
-2 |
4e-96 |
288 |
137/149 (92%) |
13102.m00818 protein peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed |
| TAIR PP10 |
AT4G19830.1 |
-2 |
3e-84 |
258 |
117/147 (80%) |
FKBP-like peptidyl-prolyl cis-trans isomerase family protein | chr4:10772579-10773933 REVERSE LENGTH=229 |
