MLOC_62839 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.518419.358317.677223.2145
LEAShoots from the seedlings (10 cm shoot stage)17.649820.820615.45518.0976
INF1Young developing inflorescences (5mm)10.309712.966812.34712.2866
INF2Developing inflorescences (1-1.5 cm)23.625120.968220.477729.0584
ROORoots from the seedlings (10 cm shoot stage)34.172836.648530.753757.9388
NODDeveloping tillers at six leaf stage, 3rd internode31.04436.141530.1593146.247
CAR5Developing grain, bracts removed (5 DPA)17.564318.913619.219923.4941
CAR15Developing grain, bracts removed (15 DPA)10.50111.541210.040730.744



CDS Structure of MLOC_62839






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62839.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249056.1NoneNoneNoneNone
MLOC_62839.1CUST_4701_PI427708080AvailableAvailablecontig_47018 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g14000.1 +3 6e-115 363 254/500 (51%) 13103.m01632 protein acyl CoA binding protein, putative, expressed
TAIR PP10 AT4G27780.1 +3 1e-19 92 53/127 (42%) | Symbols: ACBP2 | acyl-CoA binding protein 2 | chr4:13847774-13849629 FORWARD LENGTH=354