MLOC_62829 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.660046.487066.722946.94373
LEAShoots from the seedlings (10 cm shoot stage)12.049313.225518.150812.7698
INF1Young developing inflorescences (5mm)1.173191.436741.643571.37672
INF2Developing inflorescences (1-1.5 cm)0.6798320.2633911.01930.711508
ROORoots from the seedlings (10 cm shoot stage)17.3914.280312.970118.2814
NODDeveloping tillers at six leaf stage, 3rd internode20.378932.480630.9982100.418
CAR5Developing grain, bracts removed (5 DPA)2.099091.573211.632231.93336
CAR15Developing grain, bracts removed (15 DPA)0.5531620.5683410.4938211.47547



CDS Structure of MLOC_62829






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62829.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356257NoneNoneNoneNone
MLOC_62829.1CUST_4700_PI427708080AvailableAvailablecontig_47012 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g10040.1 +2 0.0 721 378/447 (85%) 13101.m01074 protein cytochrome P450, putative, expressed
TAIR PP10 AT3G13730.1 +2 0.0 543 272/443 (61%) | Symbols: CYP90D1 | cytochrome P450, family 90, subfamily D, polypeptide 1 | chr3:4498330-4500836 REVERSE LENGTH=491