MLOC_62815 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.00169.824939.041810.0603
LEAShoots from the seedlings (10 cm shoot stage)6.796573.536715.270763.74815
INF1Young developing inflorescences (5mm)21.586529.803425.657222.4755
INF2Developing inflorescences (1-1.5 cm)16.995319.552617.793120.3586
ROORoots from the seedlings (10 cm shoot stage)47.30323.443929.447725.1909
NODDeveloping tillers at six leaf stage, 3rd internode6.4667210.76619.8834423.1344
CAR5Developing grain, bracts removed (5 DPA)8.421428.529947.784368.06058
CAR15Developing grain, bracts removed (15 DPA)2.635012.29342.572786.17903



CDS Structure of MLOC_62815






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62815.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370553NoneNoneNoneNone
MLOC_62815.3CUST_4696_PI427708080AvailableAvailablecontig_46989 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g01510.1 -2 0.0 561 305/357 (85%) 13102.m00071 protein lactate/malate dehydrogenase, putative, expressed
TAIR PP10 AT4G17260.1 -2 7e-155 449 233/346 (67%) Lactate/malate dehydrogenase family protein | chr4:9674057-9675309 FORWARD LENGTH=353