- Predicted Gene MLOC_62791
MLOC_62791 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_62791_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_62791_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 8.16242 | 6.82049 | 6.3166 | 7.81347 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.39609 | 5.10603 | 4.957 | 4.40906 |
INF1 | Young developing inflorescences (5mm) | 0.143678 | 0.186441 | 0.131663 | 0.151645 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.106955 | 0.179707 | 0.314526 | 0.244833 |
ROO | Roots from the seedlings (10 cm shoot stage) | 21.0746 | 18.58 | 17.1649 | 25.1412 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.6673 | 5.6456 | 6.28896 | 19.8912 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.28774 | 6.45391 | 7.3175 | 7.38018 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.50417 | 1.34114 | 1.72574 | 4.01936 |
CDS Structure of MLOC_62791
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62791.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g01600.1 |
-2 |
0.0 |
717 |
402/483 (83%) |
13108.m00082 protein polygalacturonase, putative, expressed |
TAIR PP10 |
AT4G33440.1 |
-2 |
0.0 |
537 |
272/417 (65%) |
Pectin lyase-like superfamily protein | chr4:16092020-16094732 FORWARD LENGTH=475 |