MLOC_62787 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains27.081253.188852.689342.03
LEAShoots from the seedlings (10 cm shoot stage)33.485925.875229.445423.9003
INF1Young developing inflorescences (5mm)26.904226.20125.465220.6753
INF2Developing inflorescences (1-1.5 cm)17.393621.269321.44619.9432
ROORoots from the seedlings (10 cm shoot stage)30.617746.248540.503446.4206
NODDeveloping tillers at six leaf stage, 3rd internode26.049119.173213.150356.9561
CAR5Developing grain, bracts removed (5 DPA)26.48927.035528.944724.3358
CAR15Developing grain, bracts removed (15 DPA)15.50114.315318.916932.8365



CDS Structure of MLOC_62787






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK250336.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250336.1CUST_18829_PI427708080NoneNoneNone
MLOC_54202.1NoneAvailableNonecontig_38960 (Mapped)
MLOC_60379.2NoneAvailableNonecontig_44328 (Not mapped)
MLOC_62787.3NoneAvailableAvailablecontig_46964 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----