- Predicted Gene MLOC_62784
MLOC_62784 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 25.0493 | 16.9583 | 19.3783 | 24.0321 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 8.32349 | 5.88049 | 6.77007 | 6.60039 |
| INF1 | Young developing inflorescences (5mm) | 19.6229 | 21.5361 | 21.0774 | 20.6413 |
| INF2 | Developing inflorescences (1-1.5 cm) | 14.7772 | 17.3954 | 18.1965 | 21.6789 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 18.5411 | 15.259 | 17.6896 | 24.4432 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.1757 | 4.93305 | 6.82891 | 17.9934 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.6418 | 17.2978 | 17.4864 | 20.3311 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.51191 | 3.3441 | 3.50219 | 9.56621 |
CDS Structure of MLOC_62784
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62784.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g58750.1 |
+3 |
0.0 |
525 |
297/345 (86%) |
13101.m06241 protein expressed protein |
| TAIR PP10 |
AT5G62270.1 |
+3 |
2e-119 |
361 |
196/297 (66%) |
BEST Arabidopsis thaliana protein match is: mucin-related (TAIR:AT2G02880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:25012227-25014007 FORWARD LENGTH=383 |