MLOC_62759 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains43.771340.108641.979646.9698
LEAShoots from the seedlings (10 cm shoot stage)29.054932.115344.818633.6561
INF1Young developing inflorescences (5mm)48.703452.806149.801448.9065
INF2Developing inflorescences (1-1.5 cm)30.901538.580237.702945.0049
ROORoots from the seedlings (10 cm shoot stage)50.363652.654850.300773.6173
NODDeveloping tillers at six leaf stage, 3rd internode36.662442.915420.9406138.432
CAR5Developing grain, bracts removed (5 DPA)35.446835.999935.648640.9915
CAR15Developing grain, bracts removed (15 DPA)7.47096.957548.7392420.1392



CDS Structure of MLOC_62759






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62759.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250358.1NoneNoneNoneNone
MLOC_62759.3CUST_18260_PI427708080AvailableAvailablecontig_46911 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g35240.1 +3 0.0 603 327/359 (91%) 13104.m03426 protein CAMK_CAMK_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
TAIR PP10 AT5G63650.1 +3 3e-179 514 257/314 (82%) | Symbols: SNRK2-5, SNRK2.5, SRK2H | SNF1-related protein kinase 2.5 | chr5:25481631-25483495 REVERSE LENGTH=360