MLOC_62754 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.04478820.01875460.04862840.042194
LEAShoots from the seedlings (10 cm shoot stage)00.1040820.1467330.125846
INF1Young developing inflorescences (5mm)0.01385900.07045240.0480188
INF2Developing inflorescences (1-1.5 cm)0.0152171000.0192219
ROORoots from the seedlings (10 cm shoot stage)1.51040.8853971.692291.21726
NODDeveloping tillers at six leaf stage, 3rd internode00.02287640.05127720.131178
CAR5Developing grain, bracts removed (5 DPA)20.72210.62488.0298513.9009
CAR15Developing grain, bracts removed (15 DPA)1.529121.283141.42113.86891



CDS Structure of MLOC_62754






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62754.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375111NoneNoneNoneNone
MLOC_62754.1CUST_4683_PI427708080AvailableAvailablecontig_46932 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g12070.1 +3 0.0 822 426/615 (69%) 13101.m01298 protein endoglucanase precursor, putative, expressed
TAIR PP10 AT1G64390.1 +3 0.0 691 359/609 (59%) | Symbols: AtGH9C2, GH9C2 | glycosyl hydrolase 9C2 | chr1:23911329-23914642 FORWARD LENGTH=620