MLOC_62732 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.1427923.51717.915514.7613
LEAShoots from the seedlings (10 cm shoot stage)33.81927.117620.97221.4604
INF1Young developing inflorescences (5mm)77.996175.661967.371253.382
INF2Developing inflorescences (1-1.5 cm)90.119188.849673.817683.0099
ROORoots from the seedlings (10 cm shoot stage)11.301824.79416.001122.8163
NODDeveloping tillers at six leaf stage, 3rd internode7.0969811.976312.685936.8904
CAR5Developing grain, bracts removed (5 DPA)35.626929.27535.724827.8191
CAR15Developing grain, bracts removed (15 DPA)30.922725.361925.584954.0124



CDS Structure of MLOC_62732






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62732.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369548NoneNoneNoneNone
MLOC_62732.1CUST_18259_PI427708080AvailableAvailablecontig_46911 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g45070.1 -2 0.0 2698 1457/1588 (92%) 13107.m04747 protein FAT domain-containing protein, putative, expressed
TAIR PP10 AT2G17930.1 -2 0.0 4925 2552/3486 (73%) Phosphatidylinositol 3- and 4-kinase family protein with FAT domain | chr2:7784455-7802230 REVERSE LENGTH=3858