MLOC_62716 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains64.585780.34277.71177.3718
LEAShoots from the seedlings (10 cm shoot stage)51.916644.431647.782141.7806
INF1Young developing inflorescences (5mm)56.637155.520554.876646.921
INF2Developing inflorescences (1-1.5 cm)38.081640.771441.356144.7506
ROORoots from the seedlings (10 cm shoot stage)44.55371.601466.6584.0169
NODDeveloping tillers at six leaf stage, 3rd internode100.16681.238265.5552271.825
CAR5Developing grain, bracts removed (5 DPA)53.09353.266852.014853.1006
CAR15Developing grain, bracts removed (15 DPA)24.933124.612523.356757.777



CDS Structure of MLOC_62716






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62716.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371608NoneNoneNoneNone
MLOC_62716.1CUST_4675_PI427708080AvailableAvailablecontig_46890 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g42810.2 +3 0.0 843 426/451 (94%) 13107.m04486 protein adaptor complexes medium subunit family domain containing protein, expressed
TAIR PP10 AT4G24550.2 +3 0.0 737 367/451 (81%) Clathrin adaptor complexes medium subunit family protein | chr4:12675873-12678903 FORWARD LENGTH=451