MLOC_62713 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.421616.571586.924686.47129
LEAShoots from the seedlings (10 cm shoot stage)53.3511124.083131.25171.0858
INF1Young developing inflorescences (5mm)3.438472.578412.413232.27562
INF2Developing inflorescences (1-1.5 cm)1.985511.070661.179841.49393
ROORoots from the seedlings (10 cm shoot stage)42.571930.546138.791832.9842
NODDeveloping tillers at six leaf stage, 3rd internode51.92138.375240.588594.9827
CAR5Developing grain, bracts removed (5 DPA)13.295913.39889.5926411.35
CAR15Developing grain, bracts removed (15 DPA)4.51356.341173.8965312.2156



CDS Structure of MLOC_62713






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62713.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370936NoneNoneNoneNone
MLOC_62713.1CUST_4674_PI427708080AvailableAvailablecontig_46885 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g30320.1 -2 4e-31 118 84/120 (70%) 13102.m03311 protein drought-induced protein 1, putative, expressed
TAIR PP10 AT5G43260.1 -2 1e-12 65 56/100 (56%) chaperone protein dnaJ-related | chr5:17357693-17357986 REVERSE LENGTH=97