MLOC_62712 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.454990.7566690.9042351.09707
LEAShoots from the seedlings (10 cm shoot stage)1.496132.814992.412982.02033
INF1Young developing inflorescences (5mm)0.1956550.113210.08433650.110672
INF2Developing inflorescences (1-1.5 cm)0.08724320.082950.1113140.111011
ROORoots from the seedlings (10 cm shoot stage)0.1754260.3902830.3012960.466417
NODDeveloping tillers at six leaf stage, 3rd internode0.8530040.9265121.851623.41443
CAR5Developing grain, bracts removed (5 DPA)0.8427280.9390451.141991.07436
CAR15Developing grain, bracts removed (15 DPA)0.1827320.1974990.1519040.456013



CDS Structure of MLOC_62712






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62712.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_62712.2CUST_14465_PI427708080AvailableAvailablecontig_46884 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g01150.1 -1 4e-131 386 178/229 (78%) 13104.m00017 protein ELMO/CED-12 family protein, putative, expressed
TAIR PP10 AT1G03620.1 -1 2e-108 328 151/230 (66%) ELMO/CED-12 family protein | chr1:904319-906013 REVERSE LENGTH=265