MLOC_62705 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains41.998738.552343.542441.3509
LEAShoots from the seedlings (10 cm shoot stage)39.720541.86834.384431.4292
INF1Young developing inflorescences (5mm)13.929217.406315.871214.7516
INF2Developing inflorescences (1-1.5 cm)7.418068.169886.884568.91172
ROORoots from the seedlings (10 cm shoot stage)30.162923.29125.98127.474
NODDeveloping tillers at six leaf stage, 3rd internode26.828822.061733.54569.843
CAR5Developing grain, bracts removed (5 DPA)13.780813.815513.558714.2488
CAR15Developing grain, bracts removed (15 DPA)0.3179260.1673660.1188760.559576



CDS Structure of MLOC_62705






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62705.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358393NoneNoneNoneNone
MLOC_62705.1CUST_4673_PI427708080AvailableAvailablecontig_46879 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g06520.1 -2 0.0 1001 539/631 (85%) 13103.m00715 protein sulfate transporter, putative, expressed
TAIR PP10 AT3G51895.1 -2 0.0 850 440/617 (71%) | Symbols: SULTR3;1, AST12 | sulfate transporter 3;1 | chr3:19251503-19255677 REVERSE LENGTH=658