- Predicted Gene MLOC_62700
MLOC_62700 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_62700_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_62700_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 113.121 | 130.386 | 135.292 | 119.285 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 102.286 | 69.6659 | 83.8587 | 68.8629 |
INF1 | Young developing inflorescences (5mm) | 101.33 | 79.2235 | 63.9383 | 65.0701 |
INF2 | Developing inflorescences (1-1.5 cm) | 47.8501 | 56.2719 | 58.3424 | 54.5517 |
ROO | Roots from the seedlings (10 cm shoot stage) | 39.6046 | 99.3782 | 93.8196 | 97.6128 |
NOD | Developing tillers at six leaf stage, 3rd internode | 35.8846 | 30.9961 | 29.7178 | 95.7245 |
CAR5 | Developing grain, bracts removed (5 DPA) | 79.9433 | 80.0012 | 79.2321 | 71.2231 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.32733 | 9.99329 | 11.7009 | 21.6497 |
CDS Structure of MLOC_62700
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62700.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g43170.1 |
-3 |
0.0 |
866 |
426/465 (92%) |
13108.m04673 protein hydroxymethylglutaryl-CoA synthase, putative, expressed |
TAIR PP10 |
AT4G11820.2 |
-3 |
0.0 |
723 |
352/468 (75%) |
| Symbols: MVA1, FKP1 | hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase | chr4:7109124-7111901 REVERSE LENGTH=461 |