MLOC_6266 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.01328 | 3.16135 | 2.76656 | 3.38849 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.43589 | 2.86211 | 4.08839 | 3.04806 |
| INF1 | Young developing inflorescences (5mm) | 5.10417 | 7.46713 | 8.82622 | 6.4489 |
| INF2 | Developing inflorescences (1-1.5 cm) | 10.9031 | 9.62863 | 10.8704 | 12.1134 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.26265 | 4.99494 | 5.73168 | 6.68038 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.40432 | 9.17138 | 8.75337 | 31.3418 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.94742 | 7.07888 | 6.85883 | 7.05652 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.95632 | 2.3046 | 2.77812 | 6.59971 |
CDS Structure of MLOC_6266
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6266.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g02400.4 |
-3 |
4e-88 |
273 |
143/212 (67%) |
13109.m00158 protein RNA-binding region RNP-1, putative, expressed |
| TAIR PP10 |
AT1G05970.2 |
-3 |
4e-44 |
156 |
78/208 (38%) |
RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:1816253-1816991 REVERSE LENGTH=200 |
