MLOC_62657 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.349810.761310.987513.8021
LEAShoots from the seedlings (10 cm shoot stage)4.310760.5036430.6399261.56282
INF1Young developing inflorescences (5mm)26.12524.186121.858424.3677
INF2Developing inflorescences (1-1.5 cm)19.433330.471719.403534.2496
ROORoots from the seedlings (10 cm shoot stage)2.655445.314245.556468.24082
NODDeveloping tillers at six leaf stage, 3rd internode0.1277890.08129840.03444680.262734
CAR5Developing grain, bracts removed (5 DPA)8.303518.369598.6894710.882
CAR15Developing grain, bracts removed (15 DPA)0.3987690.1476490.4281470.868155



CDS Structure of MLOC_62657






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62657.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361949NoneNoneNoneNone
MLOC_62657.1CUST_4666_PI427708080AvailableAvailablecontig_46818 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g56070.1 -3 0.0 570 348/556 (63%) 13103.m06111 protein expressed protein
TAIR PP10 AT4G17000.1 -3 2e-28 121 99/283 (35%) unknown protein; Has 2862 Blast hits to 2331 proteins in 349 species: Archae - 6; Bacteria - 408; Metazoa - 833; Fungi - 223; Plants - 134; Viruses - 7; Other Eukaryotes - 1251 (source: NCBI BLink). | chr4:9567046-9569913 REVERSE LENGTH=674