MLOC_62656 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1213480.3532560.379890.326885
LEAShoots from the seedlings (10 cm shoot stage)5.2697412.784317.816911.3914
INF1Young developing inflorescences (5mm)0.1433930.1820830.04520350.11625
INF2Developing inflorescences (1-1.5 cm)0.02953930.02657110.2349590.087007
ROORoots from the seedlings (10 cm shoot stage)0.8828971.359090.9801491.72838
NODDeveloping tillers at six leaf stage, 3rd internode12.808311.08223.684339.0528
CAR5Developing grain, bracts removed (5 DPA)0.2960530.05991250.07413940.136502
CAR15Developing grain, bracts removed (15 DPA)0.1074970.1113910.159310.291599



CDS Structure of MLOC_62656






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62656.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372732NoneNoneNoneNone
MLOC_62656.3CUST_4665_PI427708080AvailableAvailablecontig_46818 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g42810.1 +2 0.0 560 284/336 (85%) 13103.m04602 protein endonuclease/exonuclease/phosphatase family domain containing protein, expressed
TAIR PP10 AT1G47510.1 +2 7e-113 339 173/306 (57%) | Symbols: AT5PTASE11, 5PTASE11 | inositol polyphosphate 5-phosphatase 11 | chr1:17435991-17438296 REVERSE LENGTH=334