- Predicted Gene MLOC_62654
MLOC_62654 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 5.95946 | 6.4124 | 5.08198 | 6.00678 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.09086 | 4.16495 | 4.73768 | 4.01196 |
INF1 | Young developing inflorescences (5mm) | 7.08109 | 7.76606 | 7.26234 | 6.13024 |
INF2 | Developing inflorescences (1-1.5 cm) | 6.67316 | 8.26563 | 8.00319 | 8.08022 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.0316 | 5.69937 | 4.93336 | 6.52728 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.55954 | 4.93501 | 4.39857 | 15.5257 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.8266 | 6.35301 | 7.48415 | 6.28663 |
CAR15 | Developing grain, bracts removed (15 DPA) | 7.10231 | 8.53536 | 5.98486 | 16.6484 |
CDS Structure of MLOC_62654
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62654.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g43470.1 |
+3 |
0.0 |
605 |
309/341 (91%) |
13105.m04578 protein outer membrane protein, OMP85 family, putative, expressed |
TAIR PP10 |
AT3G44160.1 |
+3 |
9e-149 |
435 |
213/341 (62%) |
Outer membrane OMP85 family protein | chr3:15889225-15891814 REVERSE LENGTH=362 |