MLOC_62640 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains20.081916.946417.036120.5524
LEAShoots from the seedlings (10 cm shoot stage)15.08214.427915.78114.5348
INF1Young developing inflorescences (5mm)21.238222.340625.809122.0711
INF2Developing inflorescences (1-1.5 cm)29.054927.16728.429934.8569
ROORoots from the seedlings (10 cm shoot stage)15.568319.111717.336427.7734
NODDeveloping tillers at six leaf stage, 3rd internode25.051528.986438.1912111.029
CAR5Developing grain, bracts removed (5 DPA)22.06822.579523.350626.1028
CAR15Developing grain, bracts removed (15 DPA)15.642115.522715.378440.5656



CDS Structure of MLOC_62640






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62640.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369579NoneNoneNoneNone
MLOC_62640.2CUST_4662_PI427708080AvailableAvailablecontig_46800 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g11170.1 +1 2e-102 310 199/244 (82%) 13106.m01209 protein formin-binding protein-related, putative, expressed
TAIR PP10 AT1G49590.1 +1 4e-51 176 139/247 (56%) C2H2 and C2HC zinc fingers superfamily protein | chr1:18354997-18356409 FORWARD LENGTH=242