MLOC_62622 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8700480.5650761.313520.841425
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)1.992981.113561.576721.36946
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_62622






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62622.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_62622.2CUST_8515_PI427708083AvailableAvailablecontig_46767 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g48030.1 -1 8e-136 396 199/291 (68%) 13107.m05131 protein peroxidase precursor, putative, expressed
TAIR PP10 AT5G05340.1 -1 3e-113 338 167/297 (56%) Peroxidase superfamily protein | chr5:1579142-1580819 REVERSE LENGTH=324