MLOC_62611 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.950179.268.042788.98722
LEAShoots from the seedlings (10 cm shoot stage)6.61224.397415.661955.13005
INF1Young developing inflorescences (5mm)22.613823.721421.973419.7035
INF2Developing inflorescences (1-1.5 cm)19.260519.265918.647121.5636
ROORoots from the seedlings (10 cm shoot stage)4.470199.382426.8314811.2194
NODDeveloping tillers at six leaf stage, 3rd internode3.470573.186887.7911814.3254
CAR5Developing grain, bracts removed (5 DPA)14.130616.120417.753816.3003
CAR15Developing grain, bracts removed (15 DPA)7.763946.792795.076415.9816



CDS Structure of MLOC_62611






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62611.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250318.1NoneNoneNoneNone
MLOC_62611.2CUST_4656_PI427708080AvailableAvailablecontig_46755 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g12270.1 -3 3e-160 469 275/461 (60%) 13109.m01109 protein peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed
TAIR PP10 AT4G25340.1 -3 2e-47 174 147/517 (28%) | Symbols: FKBP53, ATFKBP53 | FK506 BINDING PROTEIN 53 | chr4:12959657-12962632 REVERSE LENGTH=477