- Predicted Gene MLOC_62602
MLOC_62602 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_62602_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_62602_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 8.46654 | 11.0279 | 11.4713 | 6.25218 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 10.9608 | 7.66326 | 7.06607 | 4.8478 |
INF1 | Young developing inflorescences (5mm) | 24.3262 | 25.7137 | 32.8953 | 12.6479 |
INF2 | Developing inflorescences (1-1.5 cm) | 57.7625 | 30.719 | 41.4157 | 31.8527 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.11799 | 8.16257 | 8.51839 | 5.17225 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.48785 | 5.63761 | 6.58736 | 12.7408 |
CAR5 | Developing grain, bracts removed (5 DPA) | 13.6596 | 14.3994 | 15.5828 | 8.20234 |
CAR15 | Developing grain, bracts removed (15 DPA) | 10.5074 | 8.27364 | 8.01273 | 12.2794 |
CDS Structure of MLOC_62602
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62602.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g52140.2 |
+3 |
6e-74 |
234 |
111/117 (95%) |
13102.m05942 protein RNA recognition motif containing protein, putative, expressed |
TAIR PP10 |
AT5G10350.2 |
+3 |
2e-54 |
182 |
89/111 (80%) |
RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:3255808-3257746 REVERSE LENGTH=202 |