MLOC_62587 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains000.04475220.0342867
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.0262269000.0323299
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)44.928354.569556.127954.6844
CAR15Developing grain, bracts removed (15 DPA)00.031248100.0968024



CDS Structure of MLOC_62587






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62587.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_62587.2CUST_12908_PI427708083AvailableAvailablecontig_46726 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g08560.1 -3 0.0 625 316/359 (88%) 13103.m00987 protein plasma membrane ATPase, putative, expressed
TAIR PP10 AT1G17260.1 -3 0.0 561 283/355 (80%) | Symbols: AHA10 | autoinhibited H(+)-ATPase isoform 10 | chr1:5904058-5908898 FORWARD LENGTH=947