MLOC_62582 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.0313576000.0288903
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.027024900.01041820.0149924
CAR5Developing grain, bracts removed (5 DPA)2.789633.313482.037062.81021
CAR15Developing grain, bracts removed (15 DPA)78.693180.726973.0252195.397



CDS Structure of MLOC_62582






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62582.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372780NoneNoneNoneNone
AK374421NoneNoneNoneNone
MLOC_62582.3CUST_367_PI427708083AvailableAvailablecontig_46721 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g48020.1 -2 3e-141 411 209/294 (71%) 13106.m05103 protein peroxidase precursor, putative, expressed
TAIR PP10 AT4G30170.1 -2 2e-94 290 162/305 (53%) Peroxidase family protein | chr4:14762922-14764482 FORWARD LENGTH=325