MLOC_62570 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.900411.250211.178811.2673
LEAShoots from the seedlings (10 cm shoot stage)12.520811.409616.763211.3445
INF1Young developing inflorescences (5mm)7.450987.594259.039976.61841
INF2Developing inflorescences (1-1.5 cm)4.63015.513657.077826.01084
ROORoots from the seedlings (10 cm shoot stage)5.280348.181668.270419.14523
NODDeveloping tillers at six leaf stage, 3rd internode9.675069.0141114.63331.6364
CAR5Developing grain, bracts removed (5 DPA)7.406798.724169.310568.19298
CAR15Developing grain, bracts removed (15 DPA)2.111561.656522.607624.78227



CDS Structure of MLOC_62570






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62570.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251157.1NoneNoneNoneNone
MLOC_62570.3CUST_4650_PI427708080AvailableAvailablecontig_46710 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g49900.1 +3 2e-142 408 211/250 (84%) 13101.m05194 protein peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed
TAIR PP10 AT1G18440.1 +3 1e-105 315 150/195 (77%) Peptidyl-tRNA hydrolase family protein | chr1:6345994-6347686 FORWARD LENGTH=288