- Predicted Gene MLOC_62564
MLOC_62564 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 43.913 | 36.0835 | 38.5398 | 39.3832 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 35.9713 | 40.1546 | 33.9952 | 29.8579 |
| INF1 | Young developing inflorescences (5mm) | 26.5491 | 33.3684 | 40.1057 | 30.1063 |
| INF2 | Developing inflorescences (1-1.5 cm) | 59.446 | 36.6196 | 59.0865 | 56.17 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 84.5675 | 56.897 | 60.0493 | 68.586 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 37.9545 | 49.3863 | 93.0324 | 167.462 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 34.1212 | 34.1563 | 32.8377 | 34.3413 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 28.0374 | 27.3638 | 29.545 | 70.7131 |
CDS Structure of MLOC_62564
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62564.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g48800.2 |
-3 |
1e-89 |
278 |
179/229 (78%) |
13105.m05204 protein drought induced 19 protein, putative, expressed |
| TAIR PP10 |
AT3G05700.1 |
-3 |
3e-20 |
91 |
79/228 (35%) |
Drought-responsive family protein | chr3:1682432-1684323 REVERSE LENGTH=223 |
