- Predicted Gene MLOC_62561
MLOC_62561 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 7.8198 | 8.40145 | 7.98606 | 8.06743 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 19.5268 | 31.7522 | 54.691 | 29.4088 |
| INF1 | Young developing inflorescences (5mm) | 1.37339 | 2.29974 | 1.79909 | 1.57298 |
| INF2 | Developing inflorescences (1-1.5 cm) | 7.57423 | 6.85379 | 7.37474 | 7.85314 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 31.1472 | 29.9674 | 34.495 | 35.173 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 10.5489 | 12.5591 | 23.7584 | 46.0053 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 11.8692 | 13.5805 | 14.2373 | 12.6951 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 28.2202 | 32.3773 | 24.5873 | 68.2004 |
CDS Structure of MLOC_62561
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62561.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g35110.1 |
-3 |
0.0 |
562 |
309/372 (83%) |
13105.m03663 protein OsFBL22 - F-box domain and LRR containing protein, expressed |
| TAIR PP10 |
AT1G21410.1 |
-3 |
1e-151 |
455 |
235/377 (62%) |
| Symbols: SKP2A | F-box/RNI-like superfamily protein | chr1:7497479-7499386 FORWARD LENGTH=360 |