MLOC_62561 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.81988.401457.986068.06743
LEAShoots from the seedlings (10 cm shoot stage)19.526831.752254.69129.4088
INF1Young developing inflorescences (5mm)1.373392.299741.799091.57298
INF2Developing inflorescences (1-1.5 cm)7.574236.853797.374747.85314
ROORoots from the seedlings (10 cm shoot stage)31.147229.967434.49535.173
NODDeveloping tillers at six leaf stage, 3rd internode10.548912.559123.758446.0053
CAR5Developing grain, bracts removed (5 DPA)11.869213.580514.237312.6951
CAR15Developing grain, bracts removed (15 DPA)28.220232.377324.587368.2004



CDS Structure of MLOC_62561






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62561.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354704NoneNoneNoneNone
MLOC_62561.2CUST_4646_PI427708080AvailableAvailablecontig_46701 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g35110.1 -3 0.0 562 309/372 (83%) 13105.m03663 protein OsFBL22 - F-box domain and LRR containing protein, expressed
TAIR PP10 AT1G21410.1 -3 1e-151 455 235/377 (62%) | Symbols: SKP2A | F-box/RNI-like superfamily protein | chr1:7497479-7499386 FORWARD LENGTH=360