MLOC_62551 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains115.8284.597691.709390.8658
LEAShoots from the seedlings (10 cm shoot stage)21.610128.790251.192527.5494
INF1Young developing inflorescences (5mm)15.731120.869819.311715.4281
INF2Developing inflorescences (1-1.5 cm)12.340315.548813.671214.8629
ROORoots from the seedlings (10 cm shoot stage)118.03295.08473.9626109.46
NODDeveloping tillers at six leaf stage, 3rd internode26.721635.692411.362494.6906
CAR5Developing grain, bracts removed (5 DPA)28.562832.469432.097629.3521
CAR15Developing grain, bracts removed (15 DPA)16.350316.076712.819635.8312



CDS Structure of MLOC_62551






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62551.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361996NoneNoneNoneNone
MLOC_62551.1CUST_4644_PI427708080AvailableAvailablecontig_46689 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g50350.1 +2 0.0 723 373/415 (90%) 13102.m05713 protein dihydroorotate dihydrogenase protein, putative, expressed
TAIR PP10 AT3G17810.1 +2 0.0 653 316/378 (84%) | Symbols: PYD1 | pyrimidine 1 | chr3:6094279-6096289 FORWARD LENGTH=426