- Predicted Gene MLOC_62525
MLOC_62525 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 125.863 | 91.7829 | 107.551 | 109.989 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.0007 | 4.88285 | 5.53077 | 3.86921 |
| INF1 | Young developing inflorescences (5mm) | 14.1492 | 23.8559 | 17.0952 | 17.2785 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.63274 | 7.02992 | 7.26642 | 8.92548 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 167.059 | 107.358 | 91.6265 | 138.45 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 77.0577 | 67.3932 | 68.2983 | 204.537 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 14.3327 | 15.6266 | 18.9859 | 17.3226 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.10936 | 4.28751 | 4.11007 | 10.6821 |
CDS Structure of MLOC_62525
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62525.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g12230.2 |
-3 |
4e-125 |
367 |
171/219 (78%) |
13103.m01392 protein caleosin related protein, putative, expressed |
| TAIR PP10 |
AT2G33380.1 |
-3 |
3e-76 |
240 |
111/218 (51%) |
| Symbols: RD20, CLO-3 | Caleosin-related family protein | chr2:14144984-14146374 REVERSE LENGTH=236 |
