- Predicted Gene MLOC_62519
MLOC_62519 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.43695 | 4.46252 | 4.31203 | 5.75737 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 29.2684 | 85.6918 | 75.4248 | 67.9213 |
| INF1 | Young developing inflorescences (5mm) | 0.117425 | 0.114198 | 0.239986 | 0.169952 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.250665 | 0.233307 | 0.33339 | 0.357715 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 23.9234 | 19.0758 | 17.6087 | 30.0576 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.21437 | 1.99928 | 3.61812 | 8.7757 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.47328 | 0.538566 | 0.393265 | 0.589074 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.771953 | 0.551288 | 0.578004 | 1.82637 |
CDS Structure of MLOC_62519
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62519.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g51400.3 |
-1 |
4e-124 |
374 |
231/384 (60%) |
13104.m05241 protein zinc finger, C3HC4 type domain containing protein, expressed |
| TAIR PP10 |
AT5G10650.2 |
-1 |
3e-37 |
145 |
66/113 (58%) |
RING/U-box superfamily protein | chr5:3365237-3367263 REVERSE LENGTH=525 |