MLOC_62449 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.087969.197418.525567.98453
LEAShoots from the seedlings (10 cm shoot stage)10.230512.1529.81428.37181
INF1Young developing inflorescences (5mm)0.6094531.072180.3243110.605351
INF2Developing inflorescences (1-1.5 cm)4.244563.40835.967224.7221
ROORoots from the seedlings (10 cm shoot stage)39.416934.446932.422936.3714
NODDeveloping tillers at six leaf stage, 3rd internode13.71639.724929.5803824.4074
CAR5Developing grain, bracts removed (5 DPA)20.63422.149823.203221.2509
CAR15Developing grain, bracts removed (15 DPA)4.542843.345933.800559.6966



CDS Structure of MLOC_62449






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK365200
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365200CUST_24875_PI427708080NoneNoneNone
MLOC_2454.1NoneAvailableNonecontig_1217746 (Not mapped)
MLOC_25048.1NoneAvailableNonecontig_16682 (Mapped)
MLOC_25921.2NoneAvailableNonecontig_1722065 (Not mapped)
MLOC_46704.1NoneAvailableNonecontig_294484 (Not mapped)
MLOC_62449.1NoneAvailableAvailablecontig_46584 (Not mapped)
MLOC_76140.1NoneAvailableNonecontig_702681 (Not mapped)
MLOC_79259.1NoneAvailableNonecontig_841611 (Not mapped)
MLOC_80552.1NoneAvailableNonecontig_912847 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----