- Predicted Gene MLOC_62438
MLOC_62438 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 11.6761 | 7.36309 | 7.60288 | 9.8109 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.56803 | 5.14571 | 7.08438 | 6.10614 |
| INF1 | Young developing inflorescences (5mm) | 13.593 | 13.8222 | 13.5962 | 13.2305 |
| INF2 | Developing inflorescences (1-1.5 cm) | 10.5621 | 11.7736 | 12.0652 | 14.5586 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 6.05477 | 8.47407 | 6.78847 | 11.8903 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.74609 | 2.76652 | 4.99672 | 12.5667 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.486 | 12.1446 | 11.9382 | 13.6116 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.66346 | 7.38344 | 5.80932 | 18.2622 |
CDS Structure of MLOC_62438
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62438.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g68310.1 |
+2 |
2e-140 |
412 |
224/316 (71%) |
13101.m07433 protein sas10/Utp3 family protein |
| TAIR PP10 |
AT1G07840.1 |
+2 |
8e-83 |
262 |
155/287 (54%) |
Sas10/Utp3/C1D family | chr1:2424603-2426425 FORWARD LENGTH=312 |