MLOC_62437 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains48.532547.870149.177652.9897
LEAShoots from the seedlings (10 cm shoot stage)51.476146.644941.494244.1883
INF1Young developing inflorescences (5mm)62.392159.954554.963554.3557
INF2Developing inflorescences (1-1.5 cm)71.489660.161369.609478.2657
ROORoots from the seedlings (10 cm shoot stage)52.010249.133258.350670.9262
NODDeveloping tillers at six leaf stage, 3rd internode58.001860.48371.7409245.627
CAR5Developing grain, bracts removed (5 DPA)87.243786.417390.201294.7262
CAR15Developing grain, bracts removed (15 DPA)51.338743.527447.3249117.612



CDS Structure of MLOC_62437






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62437.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368009NoneNoneNoneNone
MLOC_62437.1CUST_4631_PI427708080AvailableAvailablecontig_46566 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g33810.2 -2 3e-177 504 265/327 (81%) 13109.m03375 protein ankyrin repeat domain containing protein, putative, expressed
TAIR PP10 AT4G35450.1 -2 7e-134 394 204/326 (63%) | Symbols: AKR2, AFT, AKR2A | ankyrin repeat-containing protein 2 | chr4:16839862-16841759 FORWARD LENGTH=342