MLOC_62436 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.907311.764431.550361.85096
LEAShoots from the seedlings (10 cm shoot stage)0.3179650.05461410.05501490.123766
INF1Young developing inflorescences (5mm)0.3388320.4301540.3475550.35013
INF2Developing inflorescences (1-1.5 cm)0.04829850.2356990.2615770.223637
ROORoots from the seedlings (10 cm shoot stage)6.04424.673642.904595.29301
NODDeveloping tillers at six leaf stage, 3rd internode00.010881400.081612
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0.04146030.02444590.02992260.0887349



CDS Structure of MLOC_62436






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_62436.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248579.1NoneNoneNoneNone
MLOC_62436.1CUST_4630_PI427708080AvailableAvailablecontig_46565 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g37210.1 -2 1e-134 400 250/370 (68%) 13107.m03827 protein MYB family transcription factor, putative, expressed
TAIR PP10 AT4G21440.1 -2 9e-79 254 113/129 (88%) | Symbols: ATMYB102, ATM4, MYB102 | MYB-like 102 | chr4:11418425-11419652 REVERSE LENGTH=350