- Predicted Gene MLOC_62420
MLOC_62420 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 9.39262 | 11.1711 | 12.6571 | 10.7828 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 19.7758 | 18.1039 | 14.609 | 14.2434 |
| INF1 | Young developing inflorescences (5mm) | 11.4475 | 10.4741 | 10.8295 | 8.84781 |
| INF2 | Developing inflorescences (1-1.5 cm) | 15.8237 | 16.4351 | 16.7085 | 16.7195 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 11.4573 | 16.7497 | 13.7718 | 17.782 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 15.2988 | 12.9525 | 14.1125 | 36.9412 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.4234 | 16.5011 | 15.2242 | 14.4148 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.6389 | 6.39003 | 6.9388 | 15.4281 |
CDS Structure of MLOC_62420
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62420.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g48964.1 |
-2 |
5e-86 |
278 |
132/165 (80%) |
13102.m05542 protein WD-40 repeat family protein, putative, expressed |
| TAIR PP10 |
AT5G56190.1 |
-2 |
4e-79 |
259 |
119/165 (72%) |
Transducin/WD40 repeat-like superfamily protein | chr5:22742563-22744909 FORWARD LENGTH=441 |