- Predicted Gene MLOC_62418
MLOC_62418 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 8.87095 | 8.25089 | 9.6757 | 8.02041 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 14.6671 | 16.1392 | 20.9331 | 13.7998 |
| INF1 | Young developing inflorescences (5mm) | 11.03 | 10.8195 | 11.5313 | 8.84547 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.30685 | 8.22255 | 8.10108 | 8.48253 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 11.1131 | 9.76001 | 12.7903 | 11.2281 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 17.4759 | 19.673 | 22.9784 | 62.1703 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.91397 | 7.46137 | 7.02413 | 6.23568 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.86311 | 2.32919 | 2.57068 | 5.70614 |
CDS Structure of MLOC_62418
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62418.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g38590.2 |
-1 |
1e-116 |
354 |
184/219 (84%) |
13105.m04051 protein expressed protein |
| TAIR PP10 |
AT5G09770.1 |
-1 |
3e-79 |
253 |
122/151 (81%) |
Ribosomal protein L17 family protein | chr5:3035267-3036518 REVERSE LENGTH=160 |
