- Predicted Gene MLOC_62416
MLOC_62416 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_62416_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_62416_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 26.5805 | 9.9239 | 12.793 | 19.011 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.13344 | 0.204899 | 0 | 1.5843 |
INF1 | Young developing inflorescences (5mm) | 24.4052 | 27.1228 | 31.1868 | 30.116 |
INF2 | Developing inflorescences (1-1.5 cm) | 13.1251 | 22.3376 | 19.0133 | 27.2323 |
ROO | Roots from the seedlings (10 cm shoot stage) | 12.803 | 8.62589 | 8.54645 | 12.8769 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.284396 | 0.233885 | 0.597875 |
CAR5 | Developing grain, bracts removed (5 DPA) | 7.19466 | 7.64428 | 8.80321 | 10.2202 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.683636 | 0.120404 | 0.435333 | 1.7341 |
CDS Structure of MLOC_62416
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62416.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g62230.1 |
+1 |
3e-48 |
159 |
82/83 (99%) |
13101.m06658 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed |
TAIR PP10 |
AT5G59910.1 |
+1 |
2e-47 |
156 |
80/83 (96%) |
| Symbols: HTB4 | Histone superfamily protein | chr5:24127206-24127658 FORWARD LENGTH=150 |