- Predicted Gene MLOC_62398
MLOC_62398 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_62398_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_62398_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 21.9556 | 29.626 | 29.6055 | 29.7439 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 30.3364 | 31.71 | 28.2591 | 28.0654 |
INF1 | Young developing inflorescences (5mm) | 47.6234 | 53.3532 | 58.4203 | 46.7796 |
INF2 | Developing inflorescences (1-1.5 cm) | 74.1711 | 68.9817 | 68.6135 | 80.498 |
ROO | Roots from the seedlings (10 cm shoot stage) | 29.4835 | 39.0375 | 30.872 | 50.529 |
NOD | Developing tillers at six leaf stage, 3rd internode | 32.5255 | 41.0684 | 32.6456 | 150.431 |
CAR5 | Developing grain, bracts removed (5 DPA) | 50.3202 | 49.4355 | 52.3586 | 52.0733 |
CAR15 | Developing grain, bracts removed (15 DPA) | 57.4189 | 56.1105 | 57.6289 | 135.125 |
CDS Structure of MLOC_62398
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_62398.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g55030.1 |
-3 |
0.0 |
1280 |
632/732 (86%) |
13104.m05698 protein cullin, putative, expressed |
TAIR PP10 |
AT1G26830.1 |
-3 |
0.0 |
1057 |
521/733 (71%) |
| Symbols: CUL3A, ATCUL3A, ATCUL3, CUL3 | cullin 3 | chr1:9296063-9298374 FORWARD LENGTH=732 |